Transcript: LINC01402:2

Basic information

LNCipedia transcript ID: LINC01402:2 
LNCipedia gene ID: LINC01402
Location (hg19): chrX:119251970-119253591
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 445 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017538; NONHSAT138363
Alternative gene names: XLOC_008222; linc-RHOXF1-1; TCONS_00017087


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.2855 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01402:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RHOXF1-1:2
3.1 lnc-RHOXF1-1:2
4.0 LINC01402:2
4.1 LINC01402:2
5.0 LINC01402:2
5.1 LINC01402:2
5.2 LINC01402:2