Transcript: LINC01442:2

Basic information

LNCipedia transcript ID: LINC01442:2 
LNCipedia gene ID: LINC01442
Location (hg19): chr13:61491176-61492139
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 403 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000414201; ENST00000414201.1; RP11-196P2.1-001; OTTHUMT00000045182.1; NONHSAT034122
Alternative gene names: ENSG00000227510; RP11-196P2.1; ENSG00000227510.1; OTTHUMG00000017010.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -797.8734 non-coding 
CPAT coding probability 3.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01442:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TDRD3-2:1
3.1 lnc-TDRD3-3:1
4.0 LINC01442:2
4.1 LINC01442:2
5.0 LINC01442:2
5.1 LINC01442:2
5.2 LINC01442:2