Transcript: LINC01443:3

Basic information

LNCipedia transcript ID: LINC01443:3 
HGNC Gene Symbol: LINC01443    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1443
Ensembl Gene ID: ENSG00000266554
Ensembl Transcript ID: ENST00000580967
Location (hg19): chr18:14971496-14973769
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1783 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000580967.1; RP11-527H14.2-002; OTTHUMT00000443404.1; NONHSAT058545
Alternative gene names: ENSG00000266554.1; RP11-527H14.2; OTTHUMG00000178811.1; LINC01443;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.2577 non-coding 
CPAT coding probability 16.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01443:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD30B-4:2
4.0 LINC01443:3
4.1 LINC01443:3
5.0 LINC01443:3
5.1 LINC01443:3
5.2 LINC01443:3