Transcript: LINC01446:1

Basic information

LNCipedia transcript ID: LINC01446:1 
HGNC Gene Symbol: LINC01446    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1446
Ensembl Gene ID: ENSG00000205628
Ensembl Transcript ID: ENST00000380970
RefSeq ID: NR_038371
Location (hg19): chr7:53723202-53879624
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3484 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000380970; ENST00000380970.2; GS1-179L18.1-001; OTTHUMT00000342819.1; NONHSAT120639; NR_038371; NR_038371.1
Alternative gene names: ENSG00000205628; GS1-179L18.1; ENSG00000205628.2; OTTHUMG00000156039.1; LINC01446; FLJ45974


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.0421 non-coding 
CPAT coding probability 39.78% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01446:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SEC61G-4:1
3.1 lnc-SEC61G-4:1
4.0 LINC01446:1
4.1 LINC01446:1
5.0 LINC01446:1
5.1 LINC01446:1
5.2 LINC01446:1