Transcript: LINC01447:1

Basic information

LNCipedia transcript ID: LINC01447:1 
HGNC Gene Symbol: LINC01447    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1447
Ensembl Gene ID: ENSG00000236078
Ensembl Transcript ID: ENST00000429010
RefSeq ID: NR_108090
Location (hg19): chr7:47661537-47669491
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2761 bp
Exons: 4
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00013008; ENST00000429010; ENST00000429010.1; AC095067.1-001; OTTHUMT00000340622.1; NONHSAT120517; NR_108090; NR_108090.1
Alternative gene names: XLOC_006089; linc-C7orf65-1; ENSG00000236078; AC095067.1; ENSG00000236078.1; OTTHUMG00000155554.1; LINC01447;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 52.4856 non-coding 
CPAT coding probability 8.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01447:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C7orf65-1:1
3.1 lnc-C7orf65-1:1
4.0 LINC01447:1
4.1 LINC01447:1
5.0 LINC01447:1
5.1 LINC01447:1
5.2 LINC01447:1