Transcript: LINC01470:6

Basic information

LNCipedia transcript ID: LINC01470:6 
HGNC Gene Symbol: LINC01470    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1470
Ensembl Gene ID: ENSG00000249484
Ensembl Transcript ID: ENST00000511419
Location (hg19): chr5:152264987-152351343
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 366 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00009803; ENST00000511419; ENST00000511419.1; AC091969.1-005; OTTHUMT00000373751.1; NONHSAT104658; ENST00000511419.5
Alternative gene names: XLOC_005056; linc-NMUR2-1; ENSG00000249484; AC091969.1; ENSG00000249484.4; OTTHUMG00000163486.3; ENSG00000249484.8; LINC01470;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -142.5269 non-coding 
CPAT coding probability 4.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01470:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NMUR2-1:5
3.1 lnc-NMUR2-1:6
4.0 LINC01470:6
4.1 LINC01470:6
5.0 LINC01470:6
5.1 LINC01470:6
5.2 LINC01470:6