Transcript: LINC01473:15

Basic information

LNCipedia transcript ID: LINC01473:15 
LNCipedia gene ID: LINC01473
RefSeq ID: NR_110218
Location (hg19): chr2:186898258-186951044
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 605 bp
Exons: 6
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110218.1
Alternative gene names: LINC01473


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -54.206 non-coding 
CPAT coding probability 0.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01473:15 no no no no

Available literature

  1. Brueckner (2012), Genomic rearrangements at the FRA2H common fragile site frequently involve non-homologous recombination events across LTR and L1(LINE) repeats., Hum. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01473:15
5.1 LINC01473:15
5.2 LINC01473:15