Transcript: LINC01480:5

Basic information

LNCipedia transcript ID: LINC01480:5 
LNCipedia gene ID: LINC01480
RefSeq ID: NR_110724
Location (hg19): chr19:42041860-42043266
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 478 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110724; NR_110724.1
Alternative gene names: ; LINC01480


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 27.3554 non-coding 
CPAT coding probability 2.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01480:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CEACAM21-2:6
4.0 LINC01480:5
4.1 LINC01480:5
5.0 LINC01480:5
5.1 LINC01480:5
5.2 LINC01480:5