Transcript: LINC01483:6

Basic information

LNCipedia transcript ID: LINC01483:6 
HGNC Gene Symbol: LINC01483    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1483
Ensembl Gene ID: ENSG00000227517
Ensembl Transcript ID: ENST00000433856
Location (hg19): chr17:67590926-67624492
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3085 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00025192; ENST00000433856; ENST00000433856.1; AC003051.1-001; OTTHUMT00000255327.1; NONHSAT055592; ENST00000433856.5
Alternative gene names: XLOC_012293; linc-KCNJ16-4; ENSG00000227517; AC003051.1; ENSG00000227517.1; OTTHUMG00000132249.1; ENSG00000227517.2; ENSG00000227517.6; LINC01483;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.5627 non-coding 
CPAT coding probability 5.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01483:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MAP2K6-1:2
3.1 lnc-MAP2K6-1:2
4.0 LINC01483:6
4.1 LINC01483:6
5.0 LINC01483:6
5.1 LINC01483:6
5.2 LINC01483:6