Transcript: LINC01483:9

Basic information

LNCipedia transcript ID: LINC01483:9 
LNCipedia gene ID: LINC01483
Location (hg19): chr17:67708659-67842667
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 295 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025474; NONHSAT055599
Alternative gene names: XLOC_012294; linc-KCNJ16-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.1016 non-coding 
CPAT coding probability 1.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01483:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MAP2K6-2:1
3.1 lnc-MAP2K6-2:1
4.0 LINC01483:9
4.1 LINC01483:9
5.0 LINC01483:9
5.1 LINC01483:9
5.2 LINC01483:9