Transcript: LINC01492:3

Basic information

LNCipedia transcript ID: LINC01492:3 
LNCipedia gene ID: LINC01492
Location (hg19): chr9:106026893-106087060
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 588 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Hangauer et al., 2013
Alternative transcript names: ENST00000455051; ENST00000455051.1; RP11-341A22.2-002; OTTHUMT00000053467.1; NONHSAT133777; FPKM1_group_33634_transcript_1
Alternative gene names: ENSG00000225564; RP11-341A22.2; ENSG00000225564.1; OTTHUMG00000020399.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.0168 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01492:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-OR13C4-4:2
3.1 lnc-OR13C4-4:2
4.0 LINC01492:3
4.1 LINC01492:3
5.0 LINC01492:3
5.1 LINC01492:3
5.2 LINC01492:3