Transcript: LINC01502:6

Basic information

LNCipedia transcript ID: LINC01502:6 
HGNC Gene Symbol: LINC01502    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1502
Ensembl Gene ID: ENSG00000237339
Ensembl Transcript ID: ENST00000447497
Location (hg19): chr9:138475589-138477118
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 342 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00015776; ENST00000447497; ENST00000447497.1; RP11-98L5.2-003; OTTHUMT00000055008.1; NONHSAT135460
Alternative gene names: XLOC_007609; linc-LCN9; ENSG00000237339; RP11-98L5.2; ENSG00000237339.1; OTTHUMG00000020912.1; ENSG00000237339.5; LINC01502;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 32.861 non-coding 
CPAT coding probability 2.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01502:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PAEP-1:4
3.1 lnc-PAEP-1:4
4.0 LINC01502:6
4.1 LINC01502:6
5.0 LINC01502:6
5.1 LINC01502:6
5.2 LINC01502:6