Transcript: LINC01507:2

Basic information

LNCipedia transcript ID: LINC01507:2 
LNCipedia gene ID: LINC01507
RefSeq ID: NR_121212
Location (hg19): chr9:82589938-82649470
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1027 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121212; NR_121212.1
Alternative gene names: XLOC_000303; LINC01507


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -85.2315 non-coding 
CPAT coding probability 4.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01507:2 no no no no

Available literature

  1. Shi (2015), Circulating lncRNAs associated with occurrence of colorectal cancer progression., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TLE4-2:7
4.0 LINC01507:2
4.1 LINC01507:2
5.0 LINC01507:2
5.1 LINC01507:2
5.2 LINC01507:2