Transcript: LINC01515:11

Basic information

LNCipedia transcript ID: LINC01515:11 
LNCipedia gene ID: LINC01515
Location (hg19): chr10:67345242-67375492
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 418 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00018743
Alternative gene names: XLOC_008501; linc-LRRTM3-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -107.0873 non-coding 
CPAT coding probability 1.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01515:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LRRTM3-1:1
3.1 lnc-LRRTM3-1:1
4.0 LINC01515:11
4.1 LINC01515:11
5.0 LINC01515:11
5.1 LINC01515:11
5.2 LINC01515:11