Transcript: LINC01524:22

Basic information

LNCipedia transcript ID: LINC01524:22 
LNCipedia gene ID: LINC01524
Ensembl Gene ID: ENSG00000232294
Ensembl Transcript ID: ENST00000425279
Location (hg19): chr20:51297967-51307119
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 321 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000425279; ENST00000425279.1; RP4-715N11.2-004; OTTHUMT00000259162.1; NONHSAT147173; ENST00000425279.5
Alternative gene names: ENSG00000232294; RP4-715N11.2; ENSG00000232294.1; OTTHUMG00000032760.2; ENSG00000232294.5; ; AL031674.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.3535 non-coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01524:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TSHZ2-3:5
3.1 lnc-TSHZ2-3:6
4.0 lnc-TSHZ2-3:6
4.1 LINC01524:22
5.0 LINC01524:22
5.1 LINC01524:22
5.2 LINC01524:22