Transcript: LINC01526:2

Basic information

LNCipedia transcript ID: LINC01526:2 
LNCipedia gene ID: LINC01526
RefSeq ID: NR_126363
Location (hg19): chr6:82523003-82523909
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT113748; NR_126363; NR_126363.1
Alternative gene names: Lnc-FAM46A-1; LINC01526


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.8975 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01526:2 no no no no

Available literature

  1. Gao (2014), Long non-coding RNA deregulation in tongue squamous cell carcinoma., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM46A-1:3
4.0 LINC01526:2
4.1 LINC01526:2
5.0 LINC01526:2
5.1 LINC01526:2
5.2 LINC01526:2