Transcript: LINC01543:4

Basic information

LNCipedia transcript ID: LINC01543:4 
LNCipedia gene ID: LINC01543
Location (hg19): chr18:24003100-24018000
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 621 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026302; NONHSAT058750
Alternative gene names: XLOC_012647; linc-DSG1-8; TCONS_00026302


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -163.7717 non-coding 
CPAT coding probability 14.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01543:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TAF4B-1:2
3.1 lnc-TAF4B-1:3
4.0 LINC01543:4
4.1 LINC01543:4
5.0 LINC01543:4
5.1 LINC01543:4
5.2 LINC01543:4