Transcript: LINC01563:4

Basic information

LNCipedia transcript ID: LINC01563:4 
LNCipedia gene ID: LINC01563
RefSeq ID: NR_110895
Location (hg19): chr17:20978869-20993926
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 872 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110895; NR_110895.1
Alternative gene names: ; LINC01563


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -40.695 non-coding 
CPAT coding probability 6.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01563:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHRS7B-2:6
4.0 LINC01563:4
4.1 LINC01563:4
5.0 LINC01563:4
5.1 LINC01563:4
5.2 LINC01563:4