Transcript: LINC01569:5

Basic information

LNCipedia transcript ID: LINC01569:5 
HGNC Gene Symbol: LINC01569    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1569
Ensembl Gene ID: ENSG00000262468
Ensembl Transcript ID: ENST00000573268
Location (hg19): chr16:4296567-4303780
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 694 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000573268.1; RP11-95P2.1-002; OTTHUMT00000438092.1; NONHSAT148113
Alternative gene names: ENSG00000262468.1; RP11-95P2.1; OTTHUMG00000177618.1; ENSG00000262468.5; LINC01569; TCONS_00024567


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.2601 non-coding 
CPAT coding probability 5.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01569:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SRL-2:3
4.0 LINC01569:5
4.1 LINC01569:5
5.0 LINC01569:5
5.1 LINC01569:5
5.2 LINC01569:5