Transcript: LINC01578:1

Basic information

LNCipedia transcript ID: LINC01578:1 
LNCipedia gene ID: LINC01578
Location (hg19): chr15:93425937-93441975
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1727 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT049670; ENST00000557682.2
Alternative gene names: ENSG00000272888.1; AC013394.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score -20.1012 non-coding 
CPAT coding probability 1.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01578:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHD2-6:1
4.0 LINC01578:1
4.1 LINC01578:1
5.0 LINC01578:1
5.1 LINC01578:1
5.2 LINC01578:1