Transcript: LINC01578:8

Basic information

LNCipedia transcript ID: LINC01578:8 
LNCipedia gene ID: LINC01578
Location (hg19): chr15:93426104-93428815
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 578 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: NONHSAT049674; ENST00000554669.1; ENST00000554669.5
Alternative gene names: ENSG00000272888.1; AC013394.2; ENSG00000272888.5; LINC01578;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.7226 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01578:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHD2-6:7
4.0 LINC01578:8
4.1 LINC01578:8
5.0 LINC01578:8
5.1 LINC01578:8
5.2 LINC01578:8