Transcript: LINC01580:1

Basic information

LNCipedia transcript ID: LINC01580:1 
LNCipedia gene ID: LINC01580
Location (hg19): chr15:94442473-94516882
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 461 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT050145
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.0189 non-coding 
CPAT coding probability 10.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01580:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MCTP2-4:3
4.0 LINC01580:1
4.1 LINC01580:1
5.0 LINC01580:1
5.1 LINC01580:1
5.2 LINC01580:1