Transcript: LINC01582:2

Basic information

LNCipedia transcript ID: LINC01582:2 
LNCipedia gene ID: LINC01582
Location (hg19): chr15:98624860-98646939
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2448 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023827; NONHSAT050758
Alternative gene names: XLOC_011604; linc-RGMA-3; TCONS_00023827


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.515 non-coding 
CPAT coding probability 3.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01582:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-82I10.1.1-5:1
3.1 lnc-RP11-82I10.1.1-6:2
4.0 LINC01582:2
4.1 LINC01582:2
5.0 LINC01582:2
5.1 LINC01582:2
5.2 LINC01582:2