Transcript: LINC01582:4

Basic information

LNCipedia transcript ID: LINC01582:4 
LNCipedia gene ID: LINC01582
Location (hg19): chr15:98625373-98632439
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1549 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024216; NONHSAT050762
Alternative gene names: XLOC_011604; linc-RGMA-3; TCONS_00023827


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.9322 non-coding 
CPAT coding probability 3.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01582:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-82I10.1.1-5:3
3.1 lnc-RP11-82I10.1.1-6:4
4.0 LINC01582:4
4.1 LINC01582:4
5.0 LINC01582:4
5.1 LINC01582:4
5.2 LINC01582:4