Transcript: LINC01584:12

Basic information

LNCipedia transcript ID: LINC01584:12 
HGNC Gene Symbol: LINC01584    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1584
Ensembl Gene ID: ENSG00000260477
Ensembl Transcript ID: ENST00000567981
Location (hg19): chr15:86626662-86650872
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 397 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000567981.1; RP11-553E24.2-002; OTTHUMT00000420985.1; NONHSAT048120
Alternative gene names: ENSG00000260477.1; RP11-553E24.2; OTTHUMG00000172870.1; ENSG00000260477.2; ENSG00000260477.6; LINC01584; TCONS_00024001; ENSG00000260477.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -175.0932 non-coding 
CPAT coding probability 3.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01584:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLHL25-8:9
4.0 LINC01584:12
4.1 LINC01584:12
5.0 LINC01584:12
5.1 LINC01584:12
5.2 LINC01584:12