Transcript: LINC01588:98

Basic information

LNCipedia transcript ID: LINC01588:98 
LNCipedia gene ID: LINC01588
Location (hg19): chr14:50410518-50413256
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 478 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00022741
Alternative gene names: XLOC_011017; linc-SDCCAG1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -180.513 non-coding 
CPAT coding probability 6.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01588:98 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C14orf182-1:6
3.1 lnc-C14orf182-1:6
4.0 lnc-C14orf183-1:29
4.1 lnc-C14orf183-1:29
5.0 lnc-C14orf183-1:29
5.1 LINC01588:51
5.2 LINC01588:98