Transcript: LINC01595:1

Basic information

LNCipedia transcript ID: LINC01595:1 
LNCipedia gene ID: LINC01595
Location (hg19): chr19:48368360-48370004
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 657 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT067019; FPKM1_group_14949_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.9932 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01595:1 no no no no

Available literature

  1. Ma (2015), Co‑expression of the carbamoyl‑phosphate synthase 1 gene and its long non‑coding RNA correlates with poor prognosis of patients with intrahepatic cholangiocarcinoma., Mol Med Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SULT2A1-1:3
4.0 LINC01595:1
4.1 LINC01595:1
5.0 LINC01595:1
5.1 LINC01595:1
5.2 LINC01595:1