Transcript: LINC01605:8

Basic information

LNCipedia transcript ID: LINC01605:8 
LNCipedia gene ID: LINC01605
RefSeq ID: NR_121620
Location (hg19): chr8:37263982-37351431
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1649 bp
Exons: 7
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121620; NR_121620.1
Alternative gene names: TCONS_00014973; LINC01605


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -77.051 non-coding 
CPAT coding probability 6.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01605:8 no no no no

Available literature

  1. Forrest (2018), Colon Cancer-Upregulated Long Non-Coding RNA lincDUSP Regulates Cell Cycle Genes and Potentiates Resistance to Apoptosis., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-150O12.6.1-1:16
4.0 LINC01605:8
4.1 LINC01605:8
5.0 LINC01605:8
5.1 LINC01605:8
5.2 LINC01605:8