Transcript: LINC01612:8

Basic information

LNCipedia transcript ID: LINC01612:8 
LNCipedia gene ID: LINC01612
RefSeq ID: NR_125889
Location (hg19): chr4:171147742-171204874
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1260 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125889.1
Alternative gene names: LINC01612


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -162.0009 non-coding 
CPAT coding probability 4.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01612:8 no no no no

Available literature

  1. Song (2016), Identification of differentially expressed signatures of long non-coding RNAs associated with different metastatic potentials in gastric cancer., J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01612:8
5.1 LINC01612:8
5.2 LINC01612:8