Transcript: LINC01614:11

Basic information

LNCipedia transcript ID: LINC01614:11 
LNCipedia gene ID: LINC01614
Location (hg19): chr2:216546046-216562288
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1392 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237525.2|ENCT00000235598.1
Alternative gene names: LCAL4; TCONS_00003105


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.9738 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01614:11 no no no no

Available literature

  1. White (2014), Transcriptome sequencing reveals altered long intergenic non-coding RNAs in lung cancer., Genome Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01614:11
5.0 LINC01614:11
5.1 LINC01614:11
5.2 LINC01614:11