Transcript: LINC01614:2

Basic information

LNCipedia transcript ID: LINC01614:2 
LNCipedia gene ID: LINC01614
Location (hg19): chr2:216410921-216578618
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1668 bp
Exons: 8
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003102; NONHSAT076765
Alternative gene names: XLOC_001849; linc-TMEM169-4; LCAL4; TCONS_00003105


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -167.0729 non-coding 
CPAT coding probability 3.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01614:2 no no no no

Available literature

  1. White (2014), Transcriptome sequencing reveals altered long intergenic non-coding RNAs in lung cancer., Genome Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ATIC-6:2
3.1 lnc-ATIC-7:3
4.0 LINC01614:2
4.1 LINC01614:2
5.0 LINC01614:2
5.1 LINC01614:2
5.2 LINC01614:2