Transcript: LINC01614:5

Basic information

LNCipedia transcript ID: LINC01614:5 
LNCipedia gene ID: LINC01614
Location (hg19): chr2:216542746-216554494
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 512 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT076775; FPKM1_group_18281_transcript_1
Alternative gene names: LCAL4; TCONS_00003105


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -167.0729 non-coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01614:5 no no no no

Available literature

  1. White (2014), Transcriptome sequencing reveals altered long intergenic non-coding RNAs in lung cancer., Genome Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM169-3:3
4.0 LINC01614:5
4.1 LINC01614:5
5.0 LINC01614:5
5.1 LINC01614:5
5.2 LINC01614:5