Transcript: LINC01614:8

Basic information

LNCipedia transcript ID: LINC01614:8 
HGNC Gene Symbol: LINC01614    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1614
Ensembl Gene ID: ENSG00000230838
Ensembl Transcript ID: ENST00000415479
Location (hg19): chr2:216582766-216584147
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 648 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00003105; ENST00000415479; ENST00000415479.1; AC093850.2-001; OTTHUMT00000337328.1; NONHSAT076778
Alternative gene names: XLOC_001851; linc-TMEM169-3; ENSG00000230838; AC093850.2; ENSG00000230838.1; OTTHUMG00000154838.1; LINC01614; LCAL4; TCONS_00003105


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -207.7888 non-coding 
CPAT coding probability 1.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01614:8 no no no no

Available literature

  1. White (2014), Transcriptome sequencing reveals altered long intergenic non-coding RNAs in lung cancer., Genome Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM169-3:1
3.1 lnc-TMEM169-3:1
4.0 LINC01614:8
4.1 LINC01614:8
5.0 LINC01614:8
5.1 LINC01614:8
5.2 LINC01614:8