Transcript: LINC01635:13

Basic information

LNCipedia transcript ID: LINC01635:13 
HGNC Gene Symbol: LINC01635    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1635
Ensembl Gene ID: ENSG00000228397
Ensembl Transcript ID: ENST00000635097
Location (hg19): chr1:22350490-22351976
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1023 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000635097.1
Alternative gene names: ENSG00000228397.2; RP1-224A6.3; LINC01635


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -142.9426 non-coding 
CPAT coding probability 6.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01635:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-HSPG2-1:7
4.1 lnc-HSPG2-1:7
5.0 lnc-HSPG2-1:7
5.1 LINC01635:6
5.2 LINC01635:13