Transcript: LINC01645:5

Basic information

LNCipedia transcript ID: LINC01645:5 
LNCipedia gene ID: LINC01645
RefSeq ID: NR_126001
Location (hg19): chr1:177320722-177335594
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 677 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126001; NR_126001.1
Alternative gene names: LOC102724661


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -186.5511 non-coding 
CPAT coding probability 14.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01645:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM5B-1:2
4.0 lnc-FAM5B-1:2
4.1 lnc-FAM5B-1:2
5.0 lnc-FAM5B-1:2
5.1 LINC01645:3
5.2 LINC01645:5