Transcript: LINC01660:11

Basic information

LNCipedia transcript ID: LINC01660:11 
LNCipedia gene ID: LINC01660
Location (hg19): chr22:20640889-20656782
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 8
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000428139; ENST00000428139.1; AC011718.2-001; OTTHUMT00000319602.1
Alternative gene names: ENSG00000223579; AC011718.2; ENSG00000223579.2; OTTHUMG00000150683.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.7229 non-coding 
CPAT coding probability 98.91% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01660:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP41-1:3
3.1 lnc-USP41-1:4
4.0 lnc-USP41-1:4
4.1 lnc-USP41-1:4
5.0 lnc-USP41-1:4
5.1 LINC01660:6
5.2 LINC01660:11