Transcript: LINC01676:28

Basic information

LNCipedia transcript ID: LINC01676:28 
LNCipedia gene ID: LINC01676
RefSeq ID: NR_125955
Location (hg19): chr1:106132316-106161557
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 427 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125955; NR_125955.1
Alternative gene names: LOC101928476


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -70.1804 non-coding 
CPAT coding probability 1.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01676:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AMY1B-3:14
4.0 lnc-AMY1B-3:14
4.1 lnc-AMY1B-3:14
5.0 lnc-AMY1B-3:14
5.1 LINC01676:7
5.2 LINC01676:28