Transcript: LINC01676:36

Basic information

LNCipedia transcript ID: LINC01676:36 
LNCipedia gene ID: LINC01676
Location (hg19): chr1:106132300-106148629
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 566 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT004918; ENST00000595309.1
Alternative gene names: ENSG00000230768.3; RP11-251P6.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -142.1344 non-coding 
CPAT coding probability 1.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01676:36 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AMY1B-3:11
4.0 lnc-AMY1B-3:11
4.1 lnc-AMY1B-3:11
5.0 lnc-AMY1B-3:11
5.1 LINC01676:15
5.2 LINC01676:36