Transcript: LINC01678:20

Basic information

LNCipedia transcript ID: LINC01678:20 
LNCipedia gene ID: LINC01678
Location (hg19): chr21:45576457-45579769
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2588 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225331.1|FTMT28100011029.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.5937 non-coding 
CPAT coding probability 3.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01678:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ICOSLG-6:20
5.0 lnc-ICOSLG-6:20
5.1 LINC01678:10
5.2 LINC01678:20