Transcript: LINC01681:4

Basic information

LNCipedia transcript ID: LINC01681:4 
HGNC Gene Symbol: LINC01681    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1681
Ensembl Gene ID: ENSG00000233985
Ensembl Transcript ID: ENST00000439184
Location (hg19): chr1:170143544-170210428
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 760 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000439184; ENST00000439184.1; RP11-297H3.3-001; OTTHUMT00000087602.1; NONHSAT007491
Alternative gene names: ENSG00000233985; RP11-297H3.3; ENSG00000233985.1; OTTHUMG00000035971.1; LINC01681


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.4188 non-coding 
CPAT coding probability 8.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01681:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-METTL11B-1:1
3.1 lnc-METTL11B-1:1
4.0 lnc-METTL11B-1:1
4.1 lnc-METTL11B-1:1
5.0 lnc-METTL11B-1:1
5.1 LINC01681:2
5.2 LINC01681:4