Transcript: LINC01686:4

Basic information

LNCipedia transcript ID: LINC01686:4 
LNCipedia gene ID: LINC01686
RefSeq ID: NR_036490
Location (hg19): chr1:182584275-182585764
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1490 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT008321; NR_036490; NR_036490.1
Alternative gene names: LOC284648


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -107.5889 non-coding 
CPAT coding probability 67.47% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01686:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RGSL1-2:2
4.0 lnc-RGSL1-2:2
4.1 lnc-RGSL1-2:2
5.0 lnc-RGSL1-2:2
5.1 LINC01686:2
5.2 LINC01686:4