Transcript: LINC01697:34

Basic information

LNCipedia transcript ID: LINC01697:34 
LNCipedia gene ID: LINC01697
Location (hg19): chr21:29462558-29468238
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 322 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029206; NONHSAT081590
Alternative gene names: XLOC_013900; linc-USP16-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.696 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01697:34 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP16-3:5
3.1 lnc-USP16-3:5
4.0 lnc-USP16-3:5
4.1 lnc-USP16-3:5
5.0 lnc-USP16-3:5
5.1 LINC01697:13
5.2 LINC01697:34