Transcript: LINC01708:24

Basic information

LNCipedia transcript ID: LINC01708:24 
HGNC Gene Symbol: LINC01708    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1708
Ensembl Gene ID: ENSG00000224445
Ensembl Transcript ID: ENST00000634316
Location (hg19): chr1:99937888-99958705
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 859 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000634316.1
Alternative gene names: ENSG00000224445.3; RP11-413P11.1; LINC01708


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -120.2005 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01708:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FRRS1-1:6
4.1 lnc-FRRS1-1:6
5.0 lnc-FRRS1-1:6
5.1 LINC01708:11
5.2 LINC01708:24