Transcript: LINC01708:27

Basic information

LNCipedia transcript ID: LINC01708:27 
LNCipedia gene ID: LINC01708
Location (hg19): chr1:99891593-99895068
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 218 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001604; NONHSAT004751
Alternative gene names: XLOC_000934; linc-LPPR5-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01708:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FRRS1-2:1
3.1 lnc-FRRS1-2:1
4.0 lnc-FRRS1-2:1
4.1 lnc-FRRS1-1:13
5.0 lnc-FRRS1-1:13
5.1 LINC01708:14
5.2 LINC01708:27