Transcript: LINC01718:17

Basic information

LNCipedia transcript ID: LINC01718:17 
LNCipedia gene ID: LINC01718
Location (hg19): chr20:59658196-59658897
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 552 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00028580
Alternative gene names: XLOC_013594; linc-CDH4-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -100.6008 non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01718:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDH4-2:4
3.1 lnc-CDH4-2:4
4.0 lnc-CDH4-2:4
4.1 lnc-CDH4-2:4
5.0 lnc-CDH4-2:4
5.1 LINC01718:9
5.2 LINC01718:17