Transcript: LINC01722:8

Basic information

LNCipedia transcript ID: LINC01722:8 
LNCipedia gene ID: LINC01722
Location (hg19): chr20:12927727-12931407
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 393 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028320; NONHSAT078671
Alternative gene names: XLOC_013657; linc-JAG1-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -108.2194 non-coding 
CPAT coding probability 4.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01722:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TASP1-1:2
3.1 lnc-TASP1-4:2
4.0 lnc-TASP1-4:2
4.1 lnc-TASP1-4:2
5.0 lnc-TASP1-4:2
5.1 LINC01722:4
5.2 LINC01722:8