Transcript: LINC01728:7

Basic information

LNCipedia transcript ID: LINC01728:7 
LNCipedia gene ID: LINC01728
Location (hg19): chr20:42521158-42524108
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 579 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT079841; FPKM1_group_19282_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -189.7641 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01728:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TOX2-1:4
4.0 lnc-TOX2-1:4
4.1 lnc-TOX2-1:4
5.0 lnc-TOX2-1:4
5.1 LINC01728:2
5.2 LINC01728:7