Transcript: LINC01730:10

Basic information

LNCipedia transcript ID: LINC01730:10 
LNCipedia gene ID: LINC01730
RefSeq ID: NR_109859
Location (hg19): chr20:3789141-3793081
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 706 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109859; NR_109859.1
Alternative gene names: LOC101929125


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.5788 non-coding 
CPAT coding probability 3.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01730:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDC25B-1:4
4.0 lnc-C20orf29-1:3
4.1 lnc-C20orf29-1:3
5.0 lnc-C20orf29-1:3
5.1 LINC01730:4
5.2 LINC01730:10