Transcript: LINC01730:11

Basic information

LNCipedia transcript ID: LINC01730:11 
LNCipedia gene ID: LINC01730
Location (hg19): chr20:3792106-3792912
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 381 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028488; NONHSAT078250
Alternative gene names: XLOC_013445; linc-C20orf29


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.235 non-coding 
CPAT coding probability 4.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01730:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDC25B-1:2
3.1 lnc-CDC25B-1:2
4.0 lnc-C20orf29-1:5
4.1 lnc-C20orf29-1:5
5.0 lnc-C20orf29-1:5
5.1 LINC01730:6
5.2 LINC01730:11