Transcript: LINC01736:17

Basic information

LNCipedia transcript ID: LINC01736:17 
LNCipedia gene ID: LINC01736
RefSeq ID: NR_135116
Location (hg19): chr1:230138464-230142909
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 667 bp
Exons: 2
Sources: FANTOM CAT (stringent); Refseq - NCBI Annotation Release 106
Alternative transcript names: ENSG00000228058.1|ENST00000445339.1; NR_135116.1
Alternative gene names: LOC101927532


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -279.0249 non-coding 
CPAT coding probability 1.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01736:17 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GALNT2-2:9
5.0 lnc-GALNT2-2:9
5.1 LINC01736:8
5.2 LINC01736:17